The Danish Reference Genome

After close to 5 years of work, the GenomeDenmark consortium has now finalized the efforts to establish a Danish Reference genome. The result is a reference of unrivalled quality and information depth, as compared to other similar international references and studies. Due to the unique and high quality approach, the consortium consisting of three Danish universities and the genomics company BGI Europe has been able to analyze otherwise intractable genomics regions for the first time.

Furthermore and also for the first time, the Danish study has thoroughly mapped non-simple variation among individuals. Such information increases our understanding of how genetic differences affect the health and development of disease for individuals – and is the basis for implementation of the precision medicine concept. The reference genome work is published in the leading scientific journal Nature at a time, where the Danish Regions (responsible for the Danish hospitals) and the Health Ministry is ramping up the national Precision Medicine initiative with a newly established National Genomics Center.

The GenomeDenmark project leader Prof. Karsten Kristiansen, Department of Biology, University of Copenhagen says: "With a combined national effort and unique approach, we have demonstrated that even a relatively small consortium can provide an important new genomics standard to the scientific community. We see our approach as part of the basis for the precision medicine agenda and hope that the national funding bodies and government will exploit the opportunity to increase the Danish efforts in this area - to improve the future public health and capture a health economics impact."

Mikkel Heide Schierup, Department of Bioscience, Aarhus University, one of the leading professors behind the study continues: "Even though we sequence relatively few samples (150 persons), our approach allows us to build each genome separately. This makes us independent from external references and therefore allows us to discover a much larger catalogue of complex variation than before. Actually as much as 92% of the hundreds of thousands larger structural variations we identified were novel and missed in previous studies.

"There is a lot of genetic variation related to the heritability of human diseases that awaits discovery. Therefore, continued research in this field is central for the clinical impact of genomics.

Søren Brunak, another leading GenomeDenmark professor from the Center for Protein Research at the University of Copenhagen and the Department for Bio and Health Informatics at the Technical University of Denmark explains: "We know that further research is needed to establish causative relations between many of the new genotypes discovered and disease. However, due to the world-class Danish health registers and longitudinal studies, we are uniquely positioned to couple genomics and other types of health data large scale in Denmark. And we are heading that way, hoping to be able to keep our ambitions high."

For more information about the GenomeDenmark consortium and the Danish Reference Genome, please visit:
http://www.genomedenmark.dk

Most Popular Now

AI Catches One-Third of Interval Breast …

An AI algorithm for breast cancer screening has potential to enhance the performance of digital breast tomosynthesis (DBT), reducing interval cancers by up to one-third, according to a study published...

Great plan: Now We need to Get Real abou…

The government's big plan for the 10 Year Health Plan for the NHS laid out a big role for delivery. However, the Highland Marketing advisory board felt the missing implementation...

Researchers Create 'Virtual Scienti…

There may be a new artificial intelligence-driven tool to turbocharge scientific discovery: virtual labs. Modeled after a well-established Stanford School of Medicine research group, the virtual lab is complete with an...

From WebMD to AI Chatbots: How Innovatio…

A new research article published in the Journal of Participatory Medicine unveils how successive waves of digital technology innovation have empowered patients, fostering a more collaborative and responsive health care...

New AI Tool Accelerates mRNA-Based Treat…

A new artificial intelligence (AI) model can improve the process of drug and vaccine discovery by predicting how efficiently specific mRNA sequences will produce proteins, both generally and in various...

AI also Assesses Dutch Mammograms Better…

AI is detecting tumors more often and earlier in the Dutch breast cancer screening program. Those tumors can then be treated at an earlier stage. This has been demonstrated by...

RSNA AI Challenge Models can Independent…

Algorithms submitted for an AI Challenge hosted by the Radiological Society of North America (RSNA) have shown excellent performance for detecting breast cancers on mammography images, increasing screening sensitivity while...

AI could Help Emergency Rooms Predict Ad…

Artificial intelligence (AI) can help emergency department (ED) teams better anticipate which patients will need hospital admission, hours earlier than is currently possible, according to a multi-hospital study by the...

Head-to-Head Against AI, Pharmacy Studen…

Students pursuing a Doctor of Pharmacy degree routinely take - and pass - rigorous exams to prove competency in several areas. Can ChatGPT accurately answer the same questions? A new...

NHS Active 10 Walking Tracker Users are …

Users of the NHS Active 10 app, designed to encourage people to become more active, immediately increased their amount of brisk and non-brisk walking upon using the app, according to...

New AI Tool Illuminates "Dark Side…

Proteins sustain life as we know it, serving many important structural and functional roles throughout the body. But these large molecules have cast a long shadow over a smaller subclass...

Deep Learning-Based Model Enables Fast a…

Stroke is the second leading cause of death globally. Ischemic stroke, strongly linked to atherosclerotic plaques, requires accurate plaque and vessel wall segmentation and quantification for definitive diagnosis. However, conventional...